NRD Nicotiana Resistance database  
         
 

5,420,852 potential SNP locis in the 19 pathogens have been identified and 68% of them come from the PVY which contains 3,682,016 SNP locis.Then the CMV and TMV espectively occupy the 16% and 9% follow the PVY. Obviously, the 16 remaining pathogens share the last 7%.

     
 
     
  You can search these SNP locis from the page by the pathogens ,ID and some other keys.      
       
 
Pathogens:
     
 
Subject ID
eg:gi|1890233|emb|Z92909.1|      
 
Query ID
eg: gi|388240149|emb|HE818416.1|      
 
Location
eg: 338      
       
 
     
 
An overview of the SNPs in the pathogens genome
     
       
 
Pathogens Combination number SNP number Average
Alfalfa mosaic virus(AMV) 16 4,589 286.81
Beet curly-top virus(BCTV) 3 79 26.33
Cucumber mosaic virus(CMV) 145 869,705 5,997.97
Chilli veinal mottle virus(CVMV) 5 22,082 4,416.40
Potato virus X(PVX) 16 86,399 5,399.94
Potato virus Y(PVY) 107 3,682,016 34,411.36
Tomato aspermy virus(TAV) 10 834 83.4
Tomato black ring nepo virus(TBRV) 5 234 46.8
Tobacco bushy top virus(TBTV) 7 2,307 329.57
Tobacco etch virus(TEV) 5 3,054 610.8
Tobacco leaf curl virus(TLCV) 6 1,166 194.33
Tobacco mosaic virus(TMV) 67 462,959 6,909.84
Tobacco necrosis virus (TNV) 6 3,647 607.83
Tomato ringspot nepo virus (TomRSV) 5 1,712 342.4
Tobacco streak virus(TSV) 24 16,888 703.67
Tobacco rattle virus(TRV) 21 10,593 504.43
Tomato spotted wilt virus(TSWV) 82 252,588 3,080.34