Welcome to PlantGF!

This is a database for the search and statistics of panlt families,138 representative plants are choosed for this database while they all have a relatively complete sequence and annotations.

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The gene family members of the 138 species will be find in this.

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The detail of the gene family and pivotal domain in the 138 spcies.

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The tools to find gene family or analyse the members of the gene family.

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Table 1.138 species and their detail informations show in the followings

Number Latin Name Common Name Short Name Gene Size/Mb Ploidy Release Date Version Journal
Actinidia Chinensis Kiwifruit Ach 13.05 2n=58 2013.01 V1.0 Nature communacations
Aegilops tauschii Wheat D Ata 28.43 2n=14 2014.07 V1.0 Science
Aethionema arabicum Arabia rock mustard Aar 15.34 —— 2013.08 V1.0 Nature genetics
Amaranthus hypochondriacus Amaranth Ahy 11.65 2n=32 2014.12 V1.0 DNA Research
Amborella trichopoda Amborella Atr 14.11 2n=26 2013.12 AMTR1.0 Science
Anacardium occidentale Cashew Aoc 44.41 2n=42 —— V0.9 ——
Ananas comosus Pineapple Aco 13.14 2n=28 2015.1 V3 Nature genetics
Aquilegia caerulea Colorado blue columbine Aca 22.95 —— —— V1.1 ——
Arabidopsis halleri Mouse ear cress Aha 13.88 —— 2016.09 V2.2 Nature genetics
Arabidopsis lyrata  Lyre-leaved rock cress Aly 16.28 2n=16 2011.05 V2.1 Nature genetics
Arabidopsis thaliana Thale cress Ath 18.17 2n=10 2000.12 TAIR10 Nature
Aureococcus anophagefferens Golden Globe algae Aan 6.12 —— 2011.02 V1.0 PNAS
Beta vulgaris Sugar beet Bvu 18.13 2n=18 2014.01 V1.2.2 Nature
Boea hygrometrica Boea hygrometrica Bhy 18.40 —— 2015.03 V1.0 Plant Methods
Boechera stricta Drummond's rock cress Bst 15.72 —— 2007.03 V1.2 Plant Physiology
Brachypodium distachyon Purple false brome Bdi 28.24 2n=10 2010.02 V3.1 Nature
Brachypodium stacei Brachypodium stacei Bst 20.01 2n=20 —— V1.1 ——
Brassica napus Canola Bna 36.98 2n=4×=19 2014.08 V1.0 Science
Brassica oleracea Savoy cabbage Bol 14.87 2n=18 2014.05 V1.0 Nature communacations
Brassica rapa Rape Bra 21.72 2n=20 2011.08 V1.3 Nature genetics
Cajanus cajan Pigeonpea Cca 19.56 2n=22 2011.11 V5.0 Nature biotechnology
Camelina sativa Flax mustard Csa 39.79 2n=20 2014.04 V2.0 Nature communacations
Camellia sinensis Tea tree Csi 13.99 2n=2x=30 2017.05 V1.0 Molecular Plant
Campsis grandiflora Chinese Trumpet Vine Cgr 14.39 —— —— V1.1 ——
Cannabis cansat3 Hemp Cca 9.10 2n=20 2011.1 V1.0 Genome Biology
Capsella rubella Pink shepherd's purse Cru 15.27 2n=8 2013.06 V1.0 Nature genetics
Capsicum annuum Chiltepin Chiltepin Can-C 12.11 2n=24 2014.01 V2.0 Nature genetics
Capsicum annuum Zunla-1 Zunla-1 Can-Z 14.94 2n=24 2014.01 V2.0 Nature genetics
Carica papaya Papaya Cpa 11.91 2n=18 2008.04 V0.4 Nature
Chenopodium quinoa Quinoa Cqu 23.95 2n=4x=36 2017.01 V1.0 Nature
Chlamydomonas reinhardtii Green algae Cre 16.74 —— 2007.01 V5.5 Science
Chlorella variabilis NC64A Chlorella Cvr 4.62 2n=24 2010.09 v1.0 Plant cell
Chromochloris zofingiensis Chromochloris zofingiensis Czo 9.08 —— 2017.04 V5.2.3 PNAS
Cicer arietinum Chick pea Car 11.70 2n=16 2013.01 V1.0 Nature biotechnology
Citrullus lanatus Watermelon Cla 10.42 2n=22 2012.11 V1.0 Nature genetics
Citrus clementina Clementine Ccl 18.09 2n=18 —— V1.0 ——
Citrus sinensis Sweet orange Csi 24.99 2n=18 2012.11 V1.1 Nature genetics
Coccomyxa subellipsoidea C-169 Polar microalgae Csu 5.05 —— 2012.05 V2.0 Genome Biology
Coffea canephora Arabica coffee beans Cca 8.34 2n=2x=22 2014.09 V1.0 Nature
Cucumis melo Muskmelon Cme 9.70 2n=2x=24 2012.04 V3.5 PNAS
Cucumis sativus Cucumber Csa 15.75 2n=14 2009.11 V1.0 Nature genetics
Cyanophora paradoxa Glaucophyte  Alga  Cpa 9.55 —— 2012.05 V1.0 Science
Daucus carota Carrot Dca 16.10 2n=18 2006.05 V1.0 BMC Genomics
Dendrobium catenatum Dendrobium catenatum Dca 18.37   2015.06 V2.0 Molecular Plant
Dianthus caryophyllus Carnation Dca 30.66 2n=2x=30 2013.1 V1.0 DNA Research
Dunaliella salina Dunaliella Dsa 10.33 —— —— V1.0 ——
Ectocarpus siliculosus Ectocarpus siliculosus Esi 9.47 2n=36 2009.06 V1.0 BMC Evolutionary Biology
Elaeis guineensis African oil palm Egu 23.33 2n=32 2013.07 V2.1 Nature
Emiliania huxleyi Marine rock algae Ehu 16.29 —— 2012.06 V1.0 Nature
Erythranthe guttata Yellow monkey flower Egu 16.96 —— 2013.11 V1.0 PNAS
Eucalyptus grandis Rose gum Egr 23.42 —— 2013.09 V2.0 Nature
Eutrema salsugineum Salt cress Esa 15.53 2n=14 2013.05 V1.0 Frontiers in plant science
Fragaria vesca Woodland strawberry Fve 17.78 2n=14 2010.12 V1.1 Nature genetics
Glycine max Wm82 Wild soybean Gso 21.35 2n=40 2014.07 V1.0 Nature communacations
Glycine soja Soybean Gma 49.76 2n=40 2010.01 V1.0 Nature
Gossypium hirsutum Upland Cotton Ghi 47.66 2n=4x=52 2014.01 V1.1 Nature biotechnology
Gossypium raimondii Cotton Gra 42.77 2n=26 2012.08 V2.1 Nature genetics
Hordeum vulgare L. Barley Hvu 37.09 2n=14 2012.01 V1.0 Nature
Jatropha curcas Jatropha Jcu 18.39 2n=2x=22 2011.02 V1.0 DNA Research
Kalanchoe fedtschenkoi diploid Kalanchoe Kfe 24.16 2n=2x= 34  —— V1.1 ——
Kalanchoe laxiflora Milky widow's thrill Kla 38.87 2n=4x=68 —— V1.1 Plant & Animal
Leavenworthia alabamica Alabama cress Lal 16.00 2n=22 2013.06 V1.0 Nature genetics
Leguminosae 0431-1 Sweet potato Lsa-0431-1 32.31 2N=6x=90 2015.05 V1.0 DNA Research
Leguminosae Mx23Hm Sweet potato Lsa-Mx23Hm 22.37 2N=6x=90 2015.05 V1.0 DNA Research
Lepidium meyenii Walp. Maca Lme 45.54 2n=8x=64 2016.07 V1.0 Molecular Plant
Linum usitatissimum Flax Lus 22.02 2n=30 2012.07 V1.0 Plant journal
Lotus japonicus Crowtoe Lja 11.25 2n=12 2008.04 V3.0 DNA Research
Malus domestica Apple Mdo 31.07 2n=34 2010.09 V1.0 Nature genetics
Manihot esculenta Cassava Mes 22.14 —— 2008.01 V6.1 Theoretical and applied genetics
Marchantia polymorpha Common liverwort Mpo 14.03 —— —— V3.1 ——
Medicago truncatula Barrel medic Mtr 18.79 2n=16 2011.11 V3.0 Nature
Micromonas pusilla CCMP1545 Small cell algae Mpu 5.88 —— 2009.04 V3.0 Science
Mimulus guttatus Monkey flower Mgu 17.45 2n=2x=28 2012.04 V2.0 Molecular Ecology
Moringa oleifera Drumstick tree Mol 9.79 —— —— V1.0 ——
Morus notabilis Mulberry Mno 11.43 2n=14 2013.08 V2.0 Nature communacations
Musa acuminata Banana Mac 17.77 2n=22 2012.07 V1.0 Nature
Nelumbo nucifera Gaertn EastIndianLotus Nnu 21.87 —— 2013.05 V1.1 Genome Biology
Nicotiana benthamiana Bunsen tobacco Nbe 21.68 2n=38 2012.05 V1.0 Molecular Plant
Nicotiana sylvestris Lin tobacco Nsy 22.81 2n=24 2013.03 V1.0 Genome biology
Nicotiana tabacum BX Common tobacco BX  Nta_BX 48.30 2n=4x=48 2014.05 V1.0 Nature communacations
Nicotiana tabacum K326 Common tobacco K326 Nta_K326 48.75 2n=4x=48 2014.05 V1.0 Nature communacations
Nicotiana tabacum TN90 Common tobacco TN90 Nta_TN90 49.80 2n=4x=48 2014.05 V1.0 Nature communacations
Nicotiana tomentosiformis Villous tobacco Nto 24.46 2n=24 2013.06 V1.0 Genome biology
Oropetium thomaeum Herbal selaginellae Oth 13.48 2n=2x=18 2015.11 V1.0 Nature
Oryza brachyantha Oryza brachyantha Obr 19.65 —— 2013.03 V1.4 Nature communacations
Oryza sativa japonic japonic Osa 17.10 2n=24 2002.04 V7.0 Science
Oryza sativa 9311 9311 Osa-9311 16.34 2n=24 2002.04 V1.0 Science
Ostreococcus lucimarinus Green algae Olu 3.89 —— 2007.03 V2.0 PNAS
Panicum hallii Hall's panicgrass Pha 25.57 —— —— V2.0 ——
Panicum virgatum Switchgrass Pvi 54.58 —— —— V1.1 ——
Phaeodactylum tricornutum Phaeodactylum tricornutum Ptr 5.22 —— 2008.11 V3.0 Nature
Phalaenopsis equestris Moth orchid Peq 15.57 2N=2X=38 2015.01 V1.0 Nature genetics
Phaseolus vulgaris Common bean Pvu 17.74 —— 2016.02 V1.0 Genome Biology
Phoenix dactylifera L. Date palm Pda 21.00 2n=36 2011.05 DPV01 Nature biotechnology
Phyllostachys heterocycla Bamboo Phe 16.86 2n = 48 2013.02 V1.0 Nature genetics
Physcomitrella patens Moss Ppa 47.32 —— 2008.01 V3.3 Science
Picea asperata Mast Norway spruce Pma 8.84 2n = 24 2013.05 V1.01 Nature
Populus deltoides WV94 Eastern Cottonwood Pde 29.21 —— —— V2.1 ——
Populus euphratica Euphrates poplar Peu 28.76 —— 2014.05 V1.0 Mitochondrlal DNA
Populus trichocarpa Poplar Ptr 39.49 2n=38 2006.09 V3.0 Science
Prunus mume Plum Pmu 14.15 2n=16 2012.12 V1.0 Nature communacations
Pyrus bretschneideri Pear Pbr 16.39 2n = 34 2012.11 V1.0 Genome Research
Pyunus persica Peach Ppe 27.31 2n=2x=16 2013.03 V2.1 Nature genetics
Raphanus sativus Carrot Rsa 28.18 2n=18 2014.05 V1.0 DNA Research
Ricinus communis Castor Rco 13.98 2n=20 2010.08 V0.1 Nature biotechnology
Salix purpurea Purple osier willow Spu 34.54 —— 2015.01 V1.0 Plant & Animal 
Salvia miltiorrhiza Simplified Chinese Smi 15.45 —— 2013.02 V1.0 Plos One
Schrenkiella parvula Thellungiella salsuginea Spa 12.17 2n=14 2015.08 V7.0 Mitochondrial DNA
Selaginella moellendorffii  Spikemoss Smo 10.34 —— 2011.05 V1.0 Science
Sesamum indicum Sesame Sin 1.25 2n=26 2014.01 V1.0 Genome biology
Setaria italica Foxtail millet Sit 23.10 2n=18 2012.05 V2.2 Nature biotechnology
Setaria viridis Green bristlegrass Svi 26.30 2n=18 2013.07 V1.1 Science
Sisymbrium irio Sisymbrium irio Sir 19.41 —— 2013.06 V1.0 Nature genetics
Solanum lycopersicum Tomato Sly 16.62 2n=24 2012.05 V2.4 Nature
Solanum melongena L. Eggplant Sme 27.92 2n=12 2014.09 V2.5 DNA Research
Solanum pennellii Wild tomato Spe 18.93 2n=24 2014.07 V2.0 Nature genetics
Solanum tuberosum Potato Stu 24.80 2n=4x=48 2011.07 V4.03 Nature
Sorghum bicolor Cereal grass Sbi 25.39 2n=30 2009.01 V3.1 Nature
Sphagnum fallax Bog moss Sfa 19.32 —— —— V0.5 ——
Spirodela polyrhiza Greater duckweed Spo 9.51 2n=40 2014.02 V2.0 Nature communacations
Symbiodinium kawagutii Symbiotic algae Ska 15.70 —— 2015.11 V1.0 Nature
Syngenta Syngenta Syn 16.49 2n=24 2001.02 V1.0 Science
Tarenaya hassleriana Spiderflower Tha 22.30 2n=20 2013.08 V1.0 Plant Cell 
Thellugiella  parvula Stripe mustard Tpa 10.77 2n=14 2011.08 V2.0 Nature genetics
Thellungiella halophila Thellungiella salsuginea Tha 12.84 —— 2010.11 V1.0 Plant physiology
Thellungiella salsuginea Thellungiella salsuginea Tsa 11.43 2n=14 2012.07 V2.0 PNAS
Theobroma cacao Cacao Tca 24.86 2n=20 2010.12 V1.1 Nature genetics
Trifolium pratense Red clover Tpr 20.61 2n=2x=14 2015.11 V2.0 Scientific Reports
Triticum aestivum Common wheat Tae 130.24 2n=6x=42 2012.11 V2.2 Nature
Triticum urartu Wheat A Tur 15.67 2n=14 2013.04 V1.0 Nature
Vigna angularis Red bean Van 20.74 —— 2015.08 V1.1 PNAS
Vigna radiata Mung bean Vra 19.72 2n=2x=22 2014.11 V6.0 Nature communacations
Vitis vinifera Common grape vine Vvi 13.72 2n=38 2007.09 Genoscope12X Nature
Volvox carteri Volvox Vca 12.79 —— 2010.07 V2.1 Science
Zea mays PH207  Maize PH207 Zma-PH207 35.13 2n=20 2016.11 V1.1 Plant Cell
Zea mays ssp. mays L. Maize Zma 19.44 2n=20 2009.11 V4.0 Science
Ziziphus jujuba Mill Jujube Zju 19.92 2n=2x=24 2014.01 V1.1 Nature communacations
Zostera marina  Common eelgrass Zma 10.40 2n = 12 2016.01 V2.2 Nature