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NCBI

The National Center for Biotechnology Information advances science and health by providing access to biomedical and genomic information.

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EMBL-EBI

The European Bioinformatics Institute (EMBL-EBI) shares data from life science experiments, performs basic research in computational biology and offers an extensive user training programme, supporting researchers in academia and industry.

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DDBJ

DDBJ Center collects nucleotide sequence data as a member of INSDC (International Nucleotide Sequence Database Collaboration) and provides freely available nucleotide sequence data and supercomputer system, to support research activities in life science.

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JGI

The mission of the U.S. Department of Energy Joint Genome Institute (DOE JGI), a DOE Office of Science User Facility operated by Lawrence Berkeley National Laboratory (Berkeley Lab) and part of the Biosciences Area, is to advance genomics in support of the DOE missions related to clean energy generation and environmental characterization and cleanup.

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SGN

The Sol Genomics Network (SGN) is a clade-oriented database dedicated to the biology of the Solanaceae family which includes a large number of closely related and many agronomically important species such as tomato, potato, tobacco, eggplant, pepper, and the ornamental Petunia hybrida.

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PlantGDB

The plantgdb.org web resource was managed most recently under NSF-funded project (IOS-1221984). This grant has now ended, and the PlantGDB website is no longer being updated.

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BRAD

The Brassica database (BRAD) is a web-based database of genetic data at the whole genome scale for important Brassica crops. It now provides several datasets, including the complete Brassica A genome sequence from B. rapa (Chiifu-401), derived from de novo assembly of sequence scaffolds using second-generation sequencing technologies.

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GDR

The Genome Database for Rosaceae is a curated and integrated web-based relational database providing data mining tools and publicly available genomics, genetics and breeding data for Rosaceae (almond, apple, blackberry, cherry, peach, pear, plum, raspberry, rose, and strawberry), to aid basic, translational and applied research in this economically important family.

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GRAMENE

A common set of databases are available through EnsemblGenomes and Gramene, and the two groups are collaborating on the integration of content, quality control and the development of new features.

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RAP

The Rice Annotation Project (RAP) was conceptualized in 2004 upon the completion of theOryza sativa ssp. japonica cv. Nipponbare genome sequencing by the International Rice Genome Sequencing Project with the aim of providing the scientific community with an accurate and timely annotation of the rice genome sequence.

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TAIR

The Arabidopsis Information Resource (TAIR) maintains a database of genetic and molecular biology data for the model higher plant Arabidopsis thaliana.

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GIGA

The wheat A genome, as a basic genome of bread wheat and other polyploid wheats, is centrally important to the evolution, domestication, and genetic improvement of wheat.

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