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      A platform of genetics and genomics

                             analysis and application in Nicotiana

 

Single Nucleotide Polymorphism (SNP) is a vital molecular marker to build the genetic maps for it`s abundant quantity and high polymorphism. 10,621,016 SNP locis in Nicotianahave been detected by the software of BWA,Samtools and Bcftools.


 

◇ Search SNP by Species ID or Bases.

      

Reference: Nicotiana benthamiana
Nicotiana Species: *
Genome ID: eg:Niben101Scf00005
Query Base:

 

                         

 


The SNP stats of Six Nicotiana species

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Reference Query SNP Number
Nicotiana benthamiana Nicotiana otophora                   785,204
Nicotiana sylvestris                1,872,257
Nicotiana tabacum BX                2,391,165
Nicotiana tabacum K326                2,403,132
Nicotiana tabacum TN90                2,442,813
Nicotiana tomentosiformis                   726,445
Total              10,621,016
 

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Please contact: Long Yang