EST sequence SSR


SSR

Simple Sequence Repeat (SSR) is widely used in biological science. In order to develop SSR markers, a program with Perl script was used to find the SSR unite length between 2 to 7bp and the number of repeats is from 11 to 2. As is shown in the following table:

The length of TNR 1 2 3 4 5 6 7
Least number of repeats 11 6 4 3 3 2 2

SSR Primer

According the aimed sequence, the primer were designed by a Perl script and eprimer3, and all Primers were tested by e-PCR. All these primers were also collected in PSID. You also can search and download the data as you want through this link. (SSR Primer)

SSR PSID

All the information including SSR information, Primer, even e-PCR production and others were integrated into PSID. You can search all the information through this link.