The information of the SSR loci can be searched in this page. Search Poaceae SSR loci by species, chromosome, motif (or units), the start and the end position in the genome.

Species: a drop-down list to choose the species.
Chr(scaf): the chromosome or the scaff, for example Chr, chr, Scaffold. If you don't know what it is, you can search by species and verify it.

Motif: the motif, for example at, aat, or aaat.
Units: the length of the motif, ranged from 1 to 7 in our study. The units must match with the motif you choose, or you can only choose one of them.
Start and End: the position range of the genome. Please input a number. If the SSR loci in your target position exist, the result will be print in the screen.

 

Note: the motif and the units can be used only one once a time. For example, Motif ‘AT’ or Motif Length ‘2’.



It maybe takes a few minutes, please wait for a while. If you want the detail information, please go to download page and download the SSR loci in one species. If there is a problem and haven't got the data you searched, please do not hesitate to contact us and we will send them to you when it is convenient.

Species: 

Chr(Scaf)

Motif

Units Length

Start

End